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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs2510055 chr11:77961912 C/T 1.86E-5 488 16.4 15.67 12.92 KM Plot
THCA rs2512519 chr11:77953015 C/T 2.42E-5 486 16.52 15.3 12.47 KM Plot
THCA rs2512520 chr11:77954001 G/A 2.4E-5 487 16.4 15.3 12.47 KM Plot
THCA rs2512545 chr11:77957120 C/T 2.4E-5 487 16.4 15.3 12.47 KM Plot
THCA rs2538346 chr7:76411391 C/T 2.74E-9 484 15.32 16.95 15.15 KM Plot
THCA rs2545430 chr5:114637557 T/G 0 483 16.98 17 15.27 KM Plot
THCA rs2548499 chr5:52072544 C/T 0.000284 490 10.03 14.87 16.47 KM Plot
THCA rs25678 chr21:37442632 G/C 0.000217 476 16.48 14.38 12.82 KM Plot
THCA rs2571142 chr19:44902328 G/A 0.000197 477 14.1 13.83 16.8 KM Plot
THCA rs2577766 chr2:86298351 A/G 7.79E-8 483 17.13 15.23 15.9 KM Plot
THCA rs2580772 chr2:55218805 G/T 0.00018 490 17.83 15.3 14.12 KM Plot
THCA rs2580773 chr2:55219989 A/C 0.000205 487 17.83 15.23 14.12 KM Plot
THCA rs2580774 chr2:55220021 C/T 0.000205 487 17.83 15.23 14.12 KM Plot
THCA rs2580776 chr2:55222132 G/A 0.000207 486 17.73 15.97 14.12 KM Plot
THCA rs2620721 chr12:65027511 C/A 0.000321 473 15.2 15.77 16.2 KM Plot